Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SEC1P-202ENST00000473944 940 ntBASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 AC026366.1-201ENST00000488803 879 ntBASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 AC006058.4-201ENST00000624016 1670 ntBASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.35□□□□□ -0.11
SEC22CQ9BRL7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 AP002490.2-201ENST00000524791 560 ntBASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SEC22CQ9BRL7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEC22CQ9BRL7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEC22CQ9BRL7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms