Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL13Q99616 AC145285.3-201ENST00000564603 959 ntBASIC14.18□□□□□ -0.14
CCL13Q99616 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL13Q99616 AC010654.1-201ENST00000615722 808 ntBASIC14.18□□□□□ -0.14
CCL13Q99616 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCL13Q99616 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCL13Q99616 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL13Q99616 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL13Q99616 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL13Q99616 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL13Q99616 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL13Q99616 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL13Q99616 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCL13Q99616 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCL13Q99616 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 MIR940-201ENST00000401276 94 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 AC007967.2-201ENST00000432613 625 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 PRSS29P-201ENST00000440800 595 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL13Q99616 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL13Q99616 DUX4L17-201ENST00000557360 1267 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 AC106730.1-201ENST00000566722 1090 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
CCL13Q99616 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL13Q99616 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
CCL13Q99616 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL13Q99616 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CCL13Q99616 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL13Q99616 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 TUBB8P12-201ENST00000308911 1335 ntBASIC14.16□□□□□ -0.14
CCL13Q99616 TUBB7P-202ENST00000428444 1305 ntBASIC14.16□□□□□ -0.14
CCL13Q99616 TUBB8P7-204ENST00000567960 1332 ntBASIC14.16□□□□□ -0.14
CCL13Q99616 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL13Q99616 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL13Q99616 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCL13Q99616 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCL13Q99616 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.16□□□□□ -0.14
CCL13Q99616 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL13Q99616 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL13Q99616 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms