Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 NORAD-201ENST00000565493 5339 ntBASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 AC133681.1-201ENST00000465482 601 ntBASIC15.97■□□□□ 0.15
NR1H4Q96RI1 RPS2P4-201ENST00000476944 856 ntBASIC15.97■□□□□ 0.15
NR1H4Q96RI1 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NR1H4Q96RI1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.96■□□□□ 0.15
NR1H4Q96RI1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 NIFKP9-201ENST00000419265 221 ntBASIC15.96■□□□□ 0.15
NR1H4Q96RI1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 AC128676.1-201ENST00000454392 318 ntBASIC15.96■□□□□ 0.15
NR1H4Q96RI1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 MIR3180-4-201ENST00000582223 153 ntBASIC15.96■□□□□ 0.15
NR1H4Q96RI1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 AP002414.2-201ENST00000591780 3365 ntBASIC15.96■□□□□ 0.15
NR1H4Q96RI1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.96■□□□□ 0.15
NR1H4Q96RI1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NR1H4Q96RI1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AC004980.1-204ENST00000429707 299 ntBASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AL355355.2-201ENST00000442321 338 ntBASIC15.95■□□□□ 0.14
NR1H4Q96RI1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 CD99P1-205ENST00000527459 561 ntBASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 CR392000.1-201ENST00000624770 1228 ntBASIC15.95■□□□□ 0.14
NR1H4Q96RI1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NR1H4Q96RI1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms