Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 HLA-A-201ENST00000376802 1334 ntBASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CSPG4P5Q96PW8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SLC22A20-204ENST00000530038 1673 ntBASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 MRPL20P1-201ENST00000400819 433 ntBASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 PMS2P1-201ENST00000431037 1228 ntBASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 AC129492.6-201ENST00000611383 1305 ntBASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CSPG4P5Q96PW8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 SNX33P1-201ENST00000592116 1762 ntBASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AC108751.1-201ENST00000490852 363 ntBASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AC093909.1-201ENST00000504731 1122 ntBASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AL121894.2-201ENST00000602977 491 ntBASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AL139011.1-202ENST00000642063 584 ntBASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CSPG4P5Q96PW8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 AC006538.1-201ENST00000567905 1585 ntBASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 AL353732.1-201ENST00000569618 1459 ntBASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms