Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AL391256.1-201ENST00000443260 1855 ntBASIC16.28■□□□□ 0.2
UBE2E3Q969T4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 AL356488.2-201ENST00000602755 427 ntBASIC16.27■□□□□ 0.2
UBE2E3Q969T4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 AL139011.1-202ENST00000642063 584 ntBASIC16.27■□□□□ 0.2
UBE2E3Q969T4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE2E3Q969T4 AC078925.2-201ENST00000624013 1973 ntBASIC16.27■□□□□ 0.19
UBE2E3Q969T4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.27■□□□□ 0.19
UBE2E3Q969T4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBE2E3Q969T4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 HLA-J-202ENST00000469281 1241 ntBASIC16.26■□□□□ 0.19
UBE2E3Q969T4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AC091167.2-201ENST00000579581 588 ntBASIC16.26■□□□□ 0.19
UBE2E3Q969T4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AL773604.1-201ENST00000617417 272 ntBASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 FER1L4-210ENST00000615531 5998 ntBASIC16.26■□□□□ 0.19
UBE2E3Q969T4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
UBE2E3Q969T4 AC002310.6-201ENST00000624451 1377 ntBASIC16.26■□□□□ 0.19
UBE2E3Q969T4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
UBE2E3Q969T4 AC129492.6-201ENST00000611383 1305 ntBASIC16.25■□□□□ 0.19
UBE2E3Q969T4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms