Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.74■□□□□ 0.59
HPS3Q969F9 OR7E47P-204ENST00000575924 449 ntBASIC18.74■□□□□ 0.59
HPS3Q969F9 AC008667.4-201ENST00000607370 168 ntBASIC18.74■□□□□ 0.59
HPS3Q969F9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.74■□□□□ 0.59
HPS3Q969F9 AC116407.3-201ENST00000623905 1129 ntBASIC18.74■□□□□ 0.59
HPS3Q969F9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HPS3Q969F9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPS3Q969F9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HPS3Q969F9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS3Q969F9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.74■□□□□ 0.59
HPS3Q969F9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.74■□□□□ 0.59
HPS3Q969F9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HPS3Q969F9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.74■□□□□ 0.59
HPS3Q969F9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
HPS3Q969F9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HPS3Q969F9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.73■□□□□ 0.59
HPS3Q969F9 IGHV3-65-201ENST00000523210 341 ntBASIC18.73■□□□□ 0.59
HPS3Q969F9 AC107918.2-201ENST00000530817 355 ntBASIC18.73■□□□□ 0.59
HPS3Q969F9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.73■□□□□ 0.59
HPS3Q969F9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.73■□□□□ 0.59
HPS3Q969F9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS3Q969F9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.73■□□□□ 0.59
HPS3Q969F9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS3Q969F9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
HPS3Q969F9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
HPS3Q969F9 AL671710.1-201ENST00000610245 2349 ntBASIC18.73■□□□□ 0.59
HPS3Q969F9 AC092364.2-201ENST00000596710 2692 ntBASIC18.73■□□□□ 0.59
HPS3Q969F9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 AC005052.1-201ENST00000625181 2492 ntBASIC18.73■□□□□ 0.59
HPS3Q969F9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS3Q969F9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 ALOX12P2-203ENST00000570921 1945 ntBASIC18.72■□□□□ 0.59
HPS3Q969F9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HPS3Q969F9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.72■□□□□ 0.59
HPS3Q969F9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.72■□□□□ 0.59
HPS3Q969F9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.72■□□□□ 0.59
HPS3Q969F9 AC004790.2-201ENST00000623588 572 ntBASIC18.72■□□□□ 0.59
HPS3Q969F9 AF228730.7-201ENST00000641842 219 ntBASIC18.72■□□□□ 0.59
HPS3Q969F9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 SLC22A20-204ENST00000530038 1673 ntBASIC18.72■□□□□ 0.59
HPS3Q969F9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HPS3Q969F9 HLA-A-201ENST00000376802 1334 ntBASIC18.72■□□□□ 0.59
HPS3Q969F9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
HPS3Q969F9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS3Q969F9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS3Q969F9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS3Q969F9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HPS3Q969F9 TOP3BP1-201ENST00000420768 1380 ntBASIC18.71■□□□□ 0.59
HPS3Q969F9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS3Q969F9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS3Q969F9 SNX33P1-201ENST00000592116 1762 ntBASIC18.71■□□□□ 0.59
HPS3Q969F9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
HPS3Q969F9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms