Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 GNAQP1-201ENST00000444815 1067 ntBASIC20.34■□□□□ 0.85
SNED1Q8TER0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AL079307.3-201ENST00000556114 283 ntBASIC20.34■□□□□ 0.85
SNED1Q8TER0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AC105021.1-202ENST00000570572 669 ntBASIC20.34■□□□□ 0.85
SNED1Q8TER0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.34■□□□□ 0.85
SNED1Q8TER0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 AC093525.9-201ENST00000624961 1746 ntBASIC20.34■□□□□ 0.85
SNED1Q8TER0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNED1Q8TER0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.33■□□□□ 0.85
SNED1Q8TER0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.33■□□□□ 0.85
SNED1Q8TER0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNED1Q8TER0 AC134043.2-201ENST00000624206 2238 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.33■□□□□ 0.84
SNED1Q8TER0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNED1Q8TER0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.33■□□□□ 0.84
SNED1Q8TER0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
SNED1Q8TER0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNED1Q8TER0 AC106886.1-201ENST00000568660 600 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 AC132938.2-201ENST00000579188 680 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 AL589739.1-201ENST00000607720 493 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 AL162274.1-201ENST00000617191 1098 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 AL591163.1-201ENST00000641757 987 ntBASIC20.33■□□□□ 0.84
SNED1Q8TER0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SNED1Q8TER0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNED1Q8TER0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNED1Q8TER0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNED1Q8TER0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNED1Q8TER0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 AC119751.2-201ENST00000504529 210 ntBASIC20.32■□□□□ 0.84
SNED1Q8TER0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNED1Q8TER0 CHCHD2P3-201ENST00000603038 451 ntBASIC20.32■□□□□ 0.84
SNED1Q8TER0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNED1Q8TER0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNED1Q8TER0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.32■□□□□ 0.84
SNED1Q8TER0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 AL512384.1-201ENST00000406683 331 ntBASIC20.31■□□□□ 0.84
SNED1Q8TER0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 AC135586.1-201ENST00000539323 574 ntBASIC20.31■□□□□ 0.84
SNED1Q8TER0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.31■□□□□ 0.84
SNED1Q8TER0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNED1Q8TER0 AC108860.2-201ENST00000562760 2183 ntBASIC20.31■□□□□ 0.84
SNED1Q8TER0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNED1Q8TER0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.3■□□□□ 0.84
SNED1Q8TER0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms