Protein–RNA interactions for Protein: Q8TB73

NDNF, Protein NDNF, humanhuman

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNFQ8TB73 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 LIN28AP1-201ENST00000429574 405 ntBASIC15.3■□□□□ 0.04
NDNFQ8TB73 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 ATP5G1P1-201ENST00000448724 379 ntBASIC15.3■□□□□ 0.04
NDNFQ8TB73 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 AP003041.3-201ENST00000527151 707 ntBASIC15.3■□□□□ 0.04
NDNFQ8TB73 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDNFQ8TB73 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDNFQ8TB73 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 AC006058.4-201ENST00000624016 1670 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 ECEL1P3-201ENST00000427961 737 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AC007663.1-201ENST00000438948 1240 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 AL023803.3-201ENST00000615559 522 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AC005363.2-201ENST00000618631 242 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AC010653.2-201ENST00000623505 997 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 AL596087.1-201ENST00000400979 1969 ntBASIC15.29■□□□□ 0.04
NDNFQ8TB73 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDNFQ8TB73 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NDNFQ8TB73 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
NDNFQ8TB73 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDNFQ8TB73 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNFQ8TB73 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 FAM45BP-202ENST00000592932 1624 ntBASIC15.28■□□□□ 0.04
NDNFQ8TB73 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDNFQ8TB73 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.28■□□□□ 0.04
NDNFQ8TB73 AC092338.2-201ENST00000568827 1415 ntBASIC15.28■□□□□ 0.04
NDNFQ8TB73 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDNFQ8TB73 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms