Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC140878.1-201ENST00000565277 250 ntBASIC20.7■□□□□ 0.9
RTL9Q8NET4 RN7SL204P-201ENST00000582831 262 ntBASIC20.7■□□□□ 0.9
RTL9Q8NET4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 AC008677.1-201ENST00000519230 1561 ntBASIC20.7■□□□□ 0.9
RTL9Q8NET4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 MIR943-201ENST00000401286 94 ntBASIC20.69■□□□□ 0.9
RTL9Q8NET4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 AC107890.1-201ENST00000422478 521 ntBASIC20.69■□□□□ 0.9
RTL9Q8NET4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 AC125807.1-201ENST00000483097 614 ntBASIC20.69■□□□□ 0.9
RTL9Q8NET4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL9Q8NET4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL9Q8NET4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AC006277.1-201ENST00000624348 1610 ntBASIC20.68■□□□□ 0.9
RTL9Q8NET4 FOXO1B-201ENST00000504678 1527 ntBASIC20.68■□□□□ 0.9
RTL9Q8NET4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AL133373.2-201ENST00000623187 2828 ntBASIC20.68■□□□□ 0.9
RTL9Q8NET4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AC092053.1-201ENST00000605787 1936 ntBASIC20.68■□□□□ 0.9
RTL9Q8NET4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RTL9Q8NET4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL9Q8NET4 SNX33P1-201ENST00000592116 1762 ntBASIC20.67■□□□□ 0.9
RTL9Q8NET4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.67■□□□□ 0.9
RTL9Q8NET4 AL158211.3-201ENST00000607385 239 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms