Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AC105020.1-201ENST00000435356 2205 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 RNA5SP419-201ENST00000515908 135 ntBASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 OR7E14P-202ENST00000530490 1290 ntBASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 DOC2GP-204ENST00000639052 2548 ntBASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SIMC1Q8NDZ2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 AP002414.3-201ENST00000589352 1468 ntBASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 AC073621.1-201ENST00000392730 636 ntBASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 PTCHD3P3-201ENST00000403073 906 ntBASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 SLC25A6P4-201ENST00000586535 553 ntBASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 AGGF1P2-201ENST00000426656 2106 ntBASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SIMC1Q8NDZ2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms