Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
PROM2Q8N271 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
PROM2Q8N271 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.3■■□□□ 1
PROM2Q8N271 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.3■■□□□ 1
PROM2Q8N271 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC21.3■■□□□ 1
PROM2Q8N271 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.3■■□□□ 1
PROM2Q8N271 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.3■■□□□ 1
PROM2Q8N271 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.3■■□□□ 1
PROM2Q8N271 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.3■■□□□ 1
PROM2Q8N271 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.3■■□□□ 1
PROM2Q8N271 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 TNXA-203ENST00000507684 2038 ntBASIC21.29■■□□□ 1
PROM2Q8N271 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.29■■□□□ 1
PROM2Q8N271 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.29■■□□□ 1
PROM2Q8N271 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PROM2Q8N271 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 AC098859.1-201ENST00000502915 1238 ntBASIC21.29■■□□□ 1
PROM2Q8N271 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.29■■□□□ 1
PROM2Q8N271 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.29■■□□□ 1
PROM2Q8N271 BTNL10-201ENST00000595971 695 ntBASIC21.29■■□□□ 1
PROM2Q8N271 BNIP3P41-202ENST00000616656 861 ntBASIC21.29■■□□□ 1
PROM2Q8N271 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.29■■□□□ 1
PROM2Q8N271 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.29■■□□□ 1
PROM2Q8N271 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.29■■□□□ 1
PROM2Q8N271 LINC00304-203ENST00000565008 1864 ntBASIC21.28■■□□□ 1
PROM2Q8N271 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PROM2Q8N271 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PROM2Q8N271 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 AL691447.1-201ENST00000419456 387 ntBASIC21.28■■□□□ 1
PROM2Q8N271 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 COA4-204ENST00000541455 1038 ntTSL 5 BASIC21.28■■□□□ 1
PROM2Q8N271 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.28■■□□□ 1
PROM2Q8N271 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.28■■□□□ 1
PROM2Q8N271 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.28■■□□□ 1
PROM2Q8N271 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.28■■□□□ 1
PROM2Q8N271 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PROM2Q8N271 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.27■■□□□ 1
PROM2Q8N271 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PROM2Q8N271 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.27■■□□□ 1
PROM2Q8N271 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 ELK2AP-201ENST00000392510 1007 ntBASIC21.27■■□□□ 1
PROM2Q8N271 BOLA2P3-201ENST00000404566 256 ntBASIC21.27■■□□□ 1
PROM2Q8N271 MEP1AP4-201ENST00000423244 1087 ntBASIC21.27■■□□□ 1
PROM2Q8N271 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.27■■□□□ 1
PROM2Q8N271 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.27■■□□□ 1
PROM2Q8N271 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.27■■□□□ 1
PROM2Q8N271 USP32P1-208ENST00000506594 1164 ntBASIC21.27■■□□□ 1
PROM2Q8N271 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.27■■□□□ 1
PROM2Q8N271 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PROM2Q8N271 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.27■■□□□ 1
PROM2Q8N271 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.27■■□□□ 1
PROM2Q8N271 AC026790.2-201ENST00000606282 430 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms