Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
REEP3Q6NUK4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AP005117.1-201ENST00000584346 1413 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AC243591.1-201ENST00000452967 1364 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 FER1L4-210ENST00000615531 5998 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AL590787.1-201ENST00000568856 1315 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 KRT16P4-201ENST00000453883 522 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 TERC-201ENST00000602385 541 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AL353135.1-201ENST00000606729 504 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 AL391005.1-201ENST00000623953 2435 ntBASIC15.79■□□□□ 0.12
REEP3Q6NUK4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
REEP3Q6NUK4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 ATP5G2P1-201ENST00000433580 426 ntBASIC15.78■□□□□ 0.12
REEP3Q6NUK4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 AC092119.3-201ENST00000612618 583 ntBASIC15.78■□□□□ 0.12
REEP3Q6NUK4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
REEP3Q6NUK4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
REEP3Q6NUK4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms