Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 AC023274.1-201ENST00000418278 595 ntBASIC17.78■□□□□ 0.44
RNF43Q68DV7 RPS15P9-201ENST00000494093 319 ntBASIC17.78■□□□□ 0.44
RNF43Q68DV7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF43Q68DV7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF43Q68DV7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF43Q68DV7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF43Q68DV7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
RNF43Q68DV7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 HTR5BP-201ENST00000430851 1154 ntBASIC17.77■□□□□ 0.44
RNF43Q68DV7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC108751.1-201ENST00000490852 363 ntBASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF43Q68DV7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF43Q68DV7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF43Q68DV7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF43Q68DV7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF43Q68DV7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF43Q68DV7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF43Q68DV7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF43Q68DV7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 AL590787.1-201ENST00000568856 1315 ntBASIC17.76■□□□□ 0.43
RNF43Q68DV7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 AP006288.1-201ENST00000446065 395 ntBASIC17.76■□□□□ 0.43
RNF43Q68DV7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 CYMP-203ENST00000474680 1263 ntBASIC17.76■□□□□ 0.43
RNF43Q68DV7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF43Q68DV7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
RNF43Q68DV7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms