Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATP6AP1LQ52LC2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 AC097637.2-201ENST00000624096 1997 ntBASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 SPDYE21P-201ENST00000413323 827 ntBASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP6AP1LQ52LC2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATP6AP1LQ52LC2 AC046158.3-201ENST00000624947 2558 ntBASIC16.39■□□□□ 0.22
ATP6AP1LQ52LC2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 POM121L3P-201ENST00000419331 1163 ntBASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 IGHV3-47-201ENST00000425060 335 ntBASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 AP002383.4-201ENST00000442518 975 ntBASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 AC074051.2-201ENST00000565115 352 ntBASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP6AP1LQ52LC2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 AC026691.1-201ENST00000602502 2017 ntBASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 PCED1CP-201ENST00000419887 785 ntBASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP6AP1LQ52LC2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 SIGLEC16-201ENST00000599858 1437 ntBASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms