Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 FAM86GP-201ENST00000448322 971 ntBASIC18.35■□□□□ 0.53
CDC42EP1Q00587 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC42EP1Q00587 AC016027.1-202ENST00000607927 1699 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 KRT8P39-201ENST00000396270 1433 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 SPDYE7P-202ENST00000420373 878 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 FAM58DP-201ENST00000428076 619 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 CNN2P2-201ENST00000443536 909 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 CNN2P3-201ENST00000450201 906 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AL136317.3-201ENST00000618497 906 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 AL133373.2-201ENST00000623187 2828 ntBASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDC42EP1Q00587 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CDC42EP1Q00587 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 RBPMS2P1-201ENST00000437762 623 ntBASIC18.33■□□□□ 0.52
CDC42EP1Q00587 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 AC069262.1-201ENST00000539058 672 ntBASIC18.33■□□□□ 0.52
CDC42EP1Q00587 AP000842.3-202ENST00000569238 1080 ntBASIC18.33■□□□□ 0.52
CDC42EP1Q00587 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 AC106028.4-201ENST00000614509 607 ntBASIC18.33■□□□□ 0.52
CDC42EP1Q00587 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC42EP1Q00587 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC42EP1Q00587 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms