Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNA1P78396 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNA1P78396 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNA1P78396 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNA1P78396 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNA1P78396 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNA1P78396 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCNA1P78396 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.1■□□□□ 0.65
CCNA1P78396 AL353705.2-201ENST00000428243 662 ntBASIC19.1■□□□□ 0.65
CCNA1P78396 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.1■□□□□ 0.65
CCNA1P78396 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNA1P78396 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNA1P78396 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNA1P78396 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.09■□□□□ 0.65
CCNA1P78396 AC116353.5-201ENST00000638148 1699 ntBASIC19.09■□□□□ 0.65
CCNA1P78396 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.09■□□□□ 0.65
CCNA1P78396 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.09■□□□□ 0.65
CCNA1P78396 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.09■□□□□ 0.65
CCNA1P78396 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.09■□□□□ 0.65
CCNA1P78396 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.09■□□□□ 0.65
CCNA1P78396 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.09■□□□□ 0.65
CCNA1P78396 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.09■□□□□ 0.65
CCNA1P78396 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CCNA1P78396 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCNA1P78396 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNA1P78396 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.08■□□□□ 0.65
CCNA1P78396 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCNA1P78396 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCNA1P78396 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCNA1P78396 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCNA1P78396 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CCNA1P78396 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCNA1P78396 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCNA1P78396 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.65
CCNA1P78396 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCNA1P78396 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.08■□□□□ 0.64
CCNA1P78396 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms