Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.46■□□□□ 0.07
CXCR4P61073 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 AL359075.1-203ENST00000462729 1002 ntBASIC15.46■□□□□ 0.07
CXCR4P61073 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.46■□□□□ 0.07
CXCR4P61073 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCR4P61073 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCR4P61073 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CXCR4P61073 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCR4P61073 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCR4P61073 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.46■□□□□ 0.06
CXCR4P61073 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCR4P61073 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CXCR4P61073 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.46■□□□□ 0.06
CXCR4P61073 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.46■□□□□ 0.06
CXCR4P61073 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCR4P61073 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCR4P61073 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 YBX1P2-201ENST00000489612 999 ntBASIC15.45■□□□□ 0.06
CXCR4P61073 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCR4P61073 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.45■□□□□ 0.06
CXCR4P61073 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 AC139887.4-201ENST00000607877 719 ntBASIC15.45■□□□□ 0.06
CXCR4P61073 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCR4P61073 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 AC002310.6-201ENST00000624451 1377 ntBASIC15.45■□□□□ 0.06
CXCR4P61073 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCR4P61073 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CXCR4P61073 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCR4P61073 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.44■□□□□ 0.06
CXCR4P61073 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CXCR4P61073 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.44■□□□□ 0.06
CXCR4P61073 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CXCR4P61073 AC005332.3-201ENST00000589904 676 ntBASIC15.44■□□□□ 0.06
CXCR4P61073 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.44■□□□□ 0.06
CXCR4P61073 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms