Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIMK2P53671 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.08■□□□□ 0.32
LIMK2P53671 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.08■□□□□ 0.32
LIMK2P53671 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 ACTG1P4-201ENST00000425123 1122 ntBASIC17.08■□□□□ 0.32
LIMK2P53671 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
LIMK2P53671 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.08■□□□□ 0.32
LIMK2P53671 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIMK2P53671 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.08■□□□□ 0.32
LIMK2P53671 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LIMK2P53671 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.07■□□□□ 0.32
LIMK2P53671 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.07■□□□□ 0.32
LIMK2P53671 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.07■□□□□ 0.32
LIMK2P53671 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LIMK2P53671 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LIMK2P53671 AL020989.1-201ENST00000422979 469 ntBASIC17.07■□□□□ 0.32
LIMK2P53671 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 SIGLEC30P-201ENST00000455569 941 ntBASIC17.07■□□□□ 0.32
LIMK2P53671 IGHV3-22-201ENST00000520721 359 ntBASIC17.07■□□□□ 0.32
LIMK2P53671 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 AC145285.3-201ENST00000564603 959 ntBASIC17.07■□□□□ 0.32
LIMK2P53671 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 MTDHP4-201ENST00000600287 670 ntBASIC17.07■□□□□ 0.32
LIMK2P53671 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.07■□□□□ 0.32
LIMK2P53671 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.07■□□□□ 0.32
LIMK2P53671 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIMK2P53671 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LIMK2P53671 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
LIMK2P53671 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 AL645728.1-201ENST00000366221 2101 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LIMK2P53671 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 HLA-A-202ENST00000376806 1854 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK2P53671 KRT18P13-201ENST00000400056 1290 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK2P53671 SPDYE21P-201ENST00000413323 827 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 POLD2P1-201ENST00000511220 997 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.06■□□□□ 0.32
LIMK2P53671 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.06■□□□□ 0.32
LIMK2P53671 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.06■□□□□ 0.32
LIMK2P53671 TERC-201ENST00000602385 541 ntBASIC17.06■□□□□ 0.32
LIMK2P53671 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.06■□□□□ 0.32
LIMK2P53671 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.06■□□□□ 0.32
LIMK2P53671 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
LIMK2P53671 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.06■□□□□ 0.32
LIMK2P53671 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIMK2P53671 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms