Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.41■□□□□ 0.7
ME1P48163 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.41■□□□□ 0.7
ME1P48163 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.41■□□□□ 0.7
ME1P48163 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.41■□□□□ 0.7
ME1P48163 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ME1P48163 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
ME1P48163 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 AC008894.3-201ENST00000624324 3103 ntBASIC19.4■□□□□ 0.7
ME1P48163 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.4■□□□□ 0.7
ME1P48163 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.4■□□□□ 0.7
ME1P48163 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 AL591684.3-201ENST00000605187 298 ntBASIC19.4■□□□□ 0.7
ME1P48163 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.4■□□□□ 0.7
ME1P48163 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.4■□□□□ 0.7
ME1P48163 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ME1P48163 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.39■□□□□ 0.7
ME1P48163 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ME1P48163 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
ME1P48163 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 AP002414.1-201ENST00000391405 1147 ntBASIC19.39■□□□□ 0.69
ME1P48163 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.39■□□□□ 0.69
ME1P48163 AC138894.3-201ENST00000603787 634 ntBASIC19.39■□□□□ 0.69
ME1P48163 AC010331.1-201ENST00000611423 582 ntBASIC19.39■□□□□ 0.69
ME1P48163 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.39■□□□□ 0.69
ME1P48163 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 ALOX12P2-203ENST00000570921 1945 ntBASIC19.39■□□□□ 0.69
ME1P48163 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.39■□□□□ 0.69
ME1P48163 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ME1P48163 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
ME1P48163 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ME1P48163 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.38■□□□□ 0.69
ME1P48163 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ME1P48163 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ME1P48163 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms