Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC6A12P48065 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC6A12P48065 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC6A12P48065 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A12P48065 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A12P48065 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC6A12P48065 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 AC098831.1-202ENST00000438821 336 ntBASIC16.29■□□□□ 0.2
SLC6A12P48065 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A12P48065 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A12P48065 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC6A12P48065 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
SLC6A12P48065 CYP2A7P1-201ENST00000595391 815 ntBASIC16.29■□□□□ 0.2
SLC6A12P48065 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SLC6A12P48065 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC6A12P48065 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 AL671710.1-201ENST00000610245 2349 ntBASIC16.29■□□□□ 0.2
SLC6A12P48065 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC6A12P48065 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC6A12P48065 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 KRT8P39-201ENST00000396270 1433 ntBASIC16.28■□□□□ 0.2
SLC6A12P48065 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC6A12P48065 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 AL512652.2-201ENST00000625156 1716 ntBASIC16.28■□□□□ 0.2
SLC6A12P48065 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.28■□□□□ 0.2
SLC6A12P48065 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC6A12P48065 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC6A12P48065 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 AL662844.1-201ENST00000546340 181 ntBASIC16.28■□□□□ 0.2
SLC6A12P48065 AC010654.1-201ENST00000615722 808 ntBASIC16.28■□□□□ 0.2
SLC6A12P48065 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 AC116407.3-201ENST00000623905 1129 ntBASIC16.28■□□□□ 0.2
SLC6A12P48065 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC6A12P48065 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC6A12P48065 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC6A12P48065 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC6A12P48065 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A12P48065 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SLC6A12P48065 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A12P48065 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SLC6A12P48065 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC6A12P48065 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 HCG4-201ENST00000418983 998 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 TPM4P1-201ENST00000436100 807 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 PRSS29P-201ENST00000440800 595 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms