Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.15■□□□□ 0.66
CCT6AP40227 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.15■□□□□ 0.66
CCT6AP40227 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCT6AP40227 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCT6AP40227 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCT6AP40227 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.15■□□□□ 0.66
CCT6AP40227 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCT6AP40227 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.15■□□□□ 0.66
CCT6AP40227 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCT6AP40227 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.14■□□□□ 0.66
CCT6AP40227 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.14■□□□□ 0.66
CCT6AP40227 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCT6AP40227 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCT6AP40227 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.14■□□□□ 0.65
CCT6AP40227 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCT6AP40227 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCT6AP40227 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.14■□□□□ 0.65
CCT6AP40227 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.14■□□□□ 0.65
CCT6AP40227 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.14■□□□□ 0.65
CCT6AP40227 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.14■□□□□ 0.65
CCT6AP40227 PCDHB19P-201ENST00000570871 2371 ntBASIC19.14■□□□□ 0.65
CCT6AP40227 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCT6AP40227 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCT6AP40227 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.13■□□□□ 0.65
CCT6AP40227 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.13■□□□□ 0.65
CCT6AP40227 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.13■□□□□ 0.65
CCT6AP40227 IGHV3-65-201ENST00000523210 341 ntBASIC19.13■□□□□ 0.65
CCT6AP40227 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCT6AP40227 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.13■□□□□ 0.65
CCT6AP40227 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.13■□□□□ 0.65
CCT6AP40227 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.13■□□□□ 0.65
CCT6AP40227 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.13■□□□□ 0.65
CCT6AP40227 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCT6AP40227 AC018695.7-201ENST00000624587 2492 ntBASIC19.13■□□□□ 0.65
CCT6AP40227 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCT6AP40227 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.12■□□□□ 0.65
CCT6AP40227 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCT6AP40227 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCT6AP40227 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 AC087163.2-201ENST00000457299 853 ntBASIC19.12■□□□□ 0.65
CCT6AP40227 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCT6AP40227 DUX4L17-201ENST00000557360 1267 ntBASIC19.12■□□□□ 0.65
CCT6AP40227 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.12■□□□□ 0.65
CCT6AP40227 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 GGTLC5P-201ENST00000617623 998 ntBASIC19.12■□□□□ 0.65
CCT6AP40227 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.12■□□□□ 0.65
CCT6AP40227 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.12■□□□□ 0.65
CCT6AP40227 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCT6AP40227 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms