Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 LINC01311-201ENST00000565162 1445 ntBASIC13.99□□□□□ -0.17
SNCAP37840 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 AL353692.3-201ENST00000407031 1396 ntBASIC13.99□□□□□ -0.17
SNCAP37840 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
SNCAP37840 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 AC005104.2-201ENST00000427818 678 ntBASIC13.99□□□□□ -0.17
SNCAP37840 HLA-F-220ENST00000434407 884 ntBASIC13.99□□□□□ -0.17
SNCAP37840 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.99□□□□□ -0.17
SNCAP37840 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.99□□□□□ -0.17
SNCAP37840 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 AC126177.1-201ENST00000547829 2218 ntBASIC13.99□□□□□ -0.17
SNCAP37840 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.99□□□□□ -0.17
SNCAP37840 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.99□□□□□ -0.17
SNCAP37840 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 IGHGP-201ENST00000390555 1178 ntBASIC13.98□□□□□ -0.17
SNCAP37840 AC087499.1-201ENST00000418141 1075 ntBASIC13.98□□□□□ -0.17
SNCAP37840 AL137013.1-201ENST00000432946 1228 ntBASIC13.98□□□□□ -0.17
SNCAP37840 BX664615.1-201ENST00000443558 458 ntBASIC13.98□□□□□ -0.17
SNCAP37840 MTCL1P1-201ENST00000446207 792 ntBASIC13.98□□□□□ -0.17
SNCAP37840 AL359075.1-203ENST00000462729 1002 ntBASIC13.98□□□□□ -0.17
SNCAP37840 AL441883.1-201ENST00000566170 1045 ntBASIC13.98□□□□□ -0.17
SNCAP37840 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.98□□□□□ -0.17
SNCAP37840 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 GPR32P1-201ENST00000601788 811 ntBASIC13.98□□□□□ -0.17
SNCAP37840 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.98□□□□□ -0.17
SNCAP37840 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNCAP37840 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNCAP37840 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SNCAP37840 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNCAP37840 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.97□□□□□ -0.17
SNCAP37840 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms