Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.23■□□□□ 0.67
CNGA1P29973 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNGA1P29973 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNGA1P29973 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.22■□□□□ 0.67
CNGA1P29973 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.22■□□□□ 0.67
CNGA1P29973 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.22■□□□□ 0.67
CNGA1P29973 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.22■□□□□ 0.67
CNGA1P29973 AC026150.2-201ENST00000564693 1156 ntBASIC19.22■□□□□ 0.67
CNGA1P29973 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CNGA1P29973 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNGA1P29973 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.22■□□□□ 0.67
CNGA1P29973 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNGA1P29973 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.21■□□□□ 0.67
CNGA1P29973 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.21■□□□□ 0.67
CNGA1P29973 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.21■□□□□ 0.67
CNGA1P29973 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.21■□□□□ 0.67
CNGA1P29973 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.21■□□□□ 0.67
CNGA1P29973 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 AC008761.3-201ENST00000624803 892 ntBASIC19.21■□□□□ 0.67
CNGA1P29973 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.21■□□□□ 0.67
CNGA1P29973 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNGA1P29973 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
CNGA1P29973 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNGA1P29973 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNGA1P29973 PCDHB18P-201ENST00000524813 2368 ntBASIC19.2■□□□□ 0.66
CNGA1P29973 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNGA1P29973 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.2■□□□□ 0.66
CNGA1P29973 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 HMGA1P7-201ENST00000406908 502 ntBASIC19.2■□□□□ 0.66
CNGA1P29973 SPDYE7P-202ENST00000420373 878 ntBASIC19.2■□□□□ 0.66
CNGA1P29973 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CNGA1P29973 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 HLA-J-202ENST00000469281 1241 ntBASIC19.2■□□□□ 0.66
CNGA1P29973 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.2■□□□□ 0.66
CNGA1P29973 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.2■□□□□ 0.66
CNGA1P29973 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.2■□□□□ 0.66
CNGA1P29973 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.2■□□□□ 0.66
CNGA1P29973 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CNGA1P29973 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.2■□□□□ 0.66
CNGA1P29973 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNGA1P29973 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms