Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.52■□□□□ 0.23
EPHA3P29320 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.52■□□□□ 0.23
EPHA3P29320 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA3P29320 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
EPHA3P29320 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.52■□□□□ 0.23
EPHA3P29320 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 ME2P1-201ENST00000426028 1970 ntBASIC16.51■□□□□ 0.23
EPHA3P29320 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 AC090616.6-201ENST00000582640 721 ntBASIC16.51■□□□□ 0.23
EPHA3P29320 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 AC068418.2-201ENST00000577309 3703 ntBASIC16.51■□□□□ 0.23
EPHA3P29320 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA3P29320 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA3P29320 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA3P29320 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA3P29320 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA3P29320 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 TSPY26P-202ENST00000565928 3884 ntBASIC16.5■□□□□ 0.23
EPHA3P29320 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
EPHA3P29320 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHA3P29320 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHA3P29320 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHA3P29320 DUX4L17-201ENST00000557360 1267 ntBASIC16.5■□□□□ 0.23
EPHA3P29320 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.5■□□□□ 0.23
EPHA3P29320 AC073592.5-201ENST00000624854 528 ntBASIC16.5■□□□□ 0.23
EPHA3P29320 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
EPHA3P29320 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA3P29320 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA3P29320 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 AC092850.2-201ENST00000623821 2697 ntBASIC16.5■□□□□ 0.23
EPHA3P29320 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA3P29320 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA3P29320 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA3P29320 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA3P29320 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA3P29320 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
EPHA3P29320 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms