Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ERCC2P18074 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC2P18074 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 AC006277.1-201ENST00000624348 1610 ntBASIC17.4■□□□□ 0.38
ERCC2P18074 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.4■□□□□ 0.38
ERCC2P18074 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 PRSS29P-201ENST00000440800 595 ntBASIC17.4■□□□□ 0.38
ERCC2P18074 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.4■□□□□ 0.38
ERCC2P18074 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.4■□□□□ 0.38
ERCC2P18074 MPDU1-223ENST00000582151 728 ntBASIC17.4■□□□□ 0.38
ERCC2P18074 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 AC010654.1-201ENST00000615722 808 ntBASIC17.4■□□□□ 0.38
ERCC2P18074 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.4■□□□□ 0.38
ERCC2P18074 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ERCC2P18074 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.4■□□□□ 0.38
ERCC2P18074 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERCC2P18074 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC2P18074 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.39■□□□□ 0.38
ERCC2P18074 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ERCC2P18074 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.39■□□□□ 0.38
ERCC2P18074 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERCC2P18074 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC2P18074 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC2P18074 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC2P18074 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC2P18074 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 AC013467.2-201ENST00000605472 835 ntBASIC17.39■□□□□ 0.37
ERCC2P18074 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.39■□□□□ 0.37
ERCC2P18074 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 IL9RP2-201ENST00000423948 1312 ntBASIC17.39■□□□□ 0.37
ERCC2P18074 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.39■□□□□ 0.37
ERCC2P18074 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 OR6D1P-203ENST00000641209 4860 ntBASIC17.39■□□□□ 0.37
ERCC2P18074 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.39■□□□□ 0.37
ERCC2P18074 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERCC2P18074 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 AC084018.2-201ENST00000613093 2607 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms