Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.35■□□□□ 0.85
COL11A2P13942 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.35■□□□□ 0.85
COL11A2P13942 AC123567.1-201ENST00000548294 1261 ntBASIC20.35■□□□□ 0.85
COL11A2P13942 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 AC013467.2-201ENST00000605472 835 ntBASIC20.35■□□□□ 0.85
COL11A2P13942 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.35■□□□□ 0.85
COL11A2P13942 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.34■□□□□ 0.85
COL11A2P13942 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL11A2P13942 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.34■□□□□ 0.85
COL11A2P13942 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.34■□□□□ 0.85
COL11A2P13942 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL11A2P13942 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.34■□□□□ 0.85
COL11A2P13942 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 AC087499.6-201ENST00000411576 835 ntBASIC20.34■□□□□ 0.85
COL11A2P13942 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.34■□□□□ 0.85
COL11A2P13942 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 WFDC1-204ENST00000613603 549 ntBASIC20.34■□□□□ 0.85
COL11A2P13942 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.34■□□□□ 0.85
COL11A2P13942 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL11A2P13942 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL11A2P13942 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.34■□□□□ 0.85
COL11A2P13942 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.33■□□□□ 0.85
COL11A2P13942 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
COL11A2P13942 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 AC098859.1-201ENST00000502915 1238 ntBASIC20.33■□□□□ 0.85
COL11A2P13942 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.33■□□□□ 0.85
COL11A2P13942 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.33■□□□□ 0.85
COL11A2P13942 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.33■□□□□ 0.85
COL11A2P13942 AL512343.1-201ENST00000605837 169 ntBASIC20.33■□□□□ 0.85
COL11A2P13942 MIR6799-201ENST00000620297 69 ntBASIC20.33■□□□□ 0.85
COL11A2P13942 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.33■□□□□ 0.85
COL11A2P13942 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL11A2P13942 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
COL11A2P13942 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.33■□□□□ 0.84
COL11A2P13942 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COL11A2P13942 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.33■□□□□ 0.84
COL11A2P13942 AC007389.4-201ENST00000454674 793 ntBASIC20.33■□□□□ 0.84
COL11A2P13942 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.33■□□□□ 0.84
COL11A2P13942 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL11A2P13942 SERBP1P3-201ENST00000459980 809 ntBASIC20.33■□□□□ 0.84
COL11A2P13942 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.33■□□□□ 0.84
COL11A2P13942 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.33■□□□□ 0.84
COL11A2P13942 AC092337.1-201ENST00000568699 1129 ntBASIC20.33■□□□□ 0.84
COL11A2P13942 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.33■□□□□ 0.84
COL11A2P13942 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.32■□□□□ 0.84
COL11A2P13942 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.32■□□□□ 0.84
COL11A2P13942 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 AC092552.1-201ENST00000547243 906 ntBASIC20.32■□□□□ 0.84
COL11A2P13942 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL11A2P13942 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL11A2P13942 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.32■□□□□ 0.84
COL11A2P13942 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL11A2P13942 TUBB8P12-201ENST00000308911 1335 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms