Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TMPOP1-202ENST00000424642 1267 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.9□□□□□ -0.02
UBCP0CG48 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.9□□□□□ -0.02
UBCP0CG48 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 AC092171.3-201ENST00000610122 2651 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.9□□□□□ -0.02
UBCP0CG48 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 TSPY26P-202ENST00000565928 3884 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 LINC00554-201ENST00000564841 3011 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UBCP0CG48 PMPCAP1-201ENST00000508114 1576 ntBASIC14.9□□□□□ -0.02
UBCP0CG48 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.9□□□□□ -0.02
UBCP0CG48 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 HLA-A-202ENST00000376806 1854 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 AL021920.2-201ENST00000624828 1351 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 CYP2T1P-202ENST00000641596 2535 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.89□□□□□ -0.03
UBCP0CG48 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 RCN1P1-201ENST00000400413 996 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.89□□□□□ -0.03
UBCP0CG48 AL020989.1-201ENST00000422979 469 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.89□□□□□ -0.03
UBCP0CG48 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.89□□□□□ -0.03
UBCP0CG48 AC096582.2-201ENST00000510860 516 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 INTS4P1-201ENST00000438455 1935 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 AC006449.5-201ENST00000610658 2098 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
UBCP0CG48 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.89□□□□□ -0.03
UBCP0CG48 KRT18P1-202ENST00000452408 1331 ntBASIC14.89□□□□□ -0.03
UBCP0CG48 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UBCP0CG48 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
UBCP0CG48 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 AC016734.2-201ENST00000624325 1377 ntBASIC14.88□□□□□ -0.03
UBCP0CG48 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
UBCP0CG48 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.88□□□□□ -0.03
UBCP0CG48 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
UBCP0CG48 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
UBCP0CG48 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.88□□□□□ -0.03
UBCP0CG48 AC005332.1-201ENST00000577698 1310 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms