Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
APODP05090 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 FO538757.1-201ENST00000623083 1397 ntBASIC17.04■□□□□ 0.32
APODP05090 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
APODP05090 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
APODP05090 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
APODP05090 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.04■□□□□ 0.32
APODP05090 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.04■□□□□ 0.32
APODP05090 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.04■□□□□ 0.32
APODP05090 AC069120.2-201ENST00000524091 540 ntBASIC17.04■□□□□ 0.32
APODP05090 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 MIR4492-201ENST00000581627 80 ntBASIC17.04■□□□□ 0.32
APODP05090 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.04■□□□□ 0.32
APODP05090 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.04■□□□□ 0.32
APODP05090 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APODP05090 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.04■□□□□ 0.32
APODP05090 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
APODP05090 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APODP05090 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.04■□□□□ 0.32
APODP05090 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
APODP05090 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.04■□□□□ 0.32
APODP05090 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.03■□□□□ 0.32
APODP05090 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.03■□□□□ 0.32
APODP05090 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.03■□□□□ 0.32
APODP05090 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
APODP05090 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
APODP05090 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APODP05090 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APODP05090 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
APODP05090 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
APODP05090 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.03■□□□□ 0.32
APODP05090 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.03■□□□□ 0.32
APODP05090 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
APODP05090 AL158211.3-201ENST00000607385 239 ntBASIC17.03■□□□□ 0.32
APODP05090 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.03■□□□□ 0.32
APODP05090 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APODP05090 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APODP05090 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.02■□□□□ 0.32
APODP05090 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.02■□□□□ 0.32
APODP05090 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.02■□□□□ 0.32
APODP05090 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.02■□□□□ 0.32
APODP05090 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 LINC00896-202ENST00000609602 2128 ntBASIC17.02■□□□□ 0.32
APODP05090 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.02■□□□□ 0.32
APODP05090 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.02■□□□□ 0.32
APODP05090 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.02■□□□□ 0.32
APODP05090 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 AL512638.1-201ENST00000457493 794 ntBASIC17.02■□□□□ 0.32
APODP05090 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.02■□□□□ 0.32
APODP05090 AL390754.1-201ENST00000619088 582 ntBASIC17.02■□□□□ 0.32
APODP05090 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APODP05090 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APODP05090 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APODP05090 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APODP05090 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.02■□□□□ 0.31
APODP05090 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
APODP05090 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
APODP05090 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms