Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 EGFEM1P-202ENST00000431685 1563 ntBASIC13.45□□□□□ -0.26
IFNA1P01562 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.44□□□□□ -0.26
IFNA1P01562 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.44□□□□□ -0.26
IFNA1P01562 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CDCA4P2-201ENST00000441182 718 ntBASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 AC006970.2-201ENST00000450065 779 ntBASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.44□□□□□ -0.26
IFNA1P01562 AC113404.2-201ENST00000507884 177 ntBASIC13.44□□□□□ -0.26
IFNA1P01562 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 AL138781.1-201ENST00000566567 1274 ntBASIC13.44□□□□□ -0.26
IFNA1P01562 SLC25A1P4-201ENST00000567977 778 ntBASIC13.44□□□□□ -0.26
IFNA1P01562 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.44□□□□□ -0.26
IFNA1P01562 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
IFNA1P01562 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
IFNA1P01562 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.44□□□□□ -0.26
IFNA1P01562 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.44□□□□□ -0.26
IFNA1P01562 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
IFNA1P01562 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFNA1P01562 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 ALOX12P2-203ENST00000570921 1945 ntBASIC13.43□□□□□ -0.26
IFNA1P01562 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 AC022517.1-201ENST00000592429 346 ntBASIC13.43□□□□□ -0.26
IFNA1P01562 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 AC110285.5-201ENST00000611501 352 ntBASIC13.43□□□□□ -0.26
IFNA1P01562 CR769767.2-201ENST00000622735 460 ntBASIC13.43□□□□□ -0.26
IFNA1P01562 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
IFNA1P01562 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.43□□□□□ -0.26
IFNA1P01562 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.43□□□□□ -0.26
IFNA1P01562 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFNA1P01562 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.43□□□□□ -0.26
IFNA1P01562 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 TUBB8P12-201ENST00000308911 1335 ntBASIC13.42□□□□□ -0.26
IFNA1P01562 TUBB7P-202ENST00000428444 1305 ntBASIC13.42□□□□□ -0.26
IFNA1P01562 TUBB8P7-204ENST00000567960 1332 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms