Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 AC009336.1-201ENST00000608941 1553 ntBASIC15.42■□□□□ 0.06
KRT33AO76009 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.42■□□□□ 0.06
KRT33AO76009 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT33AO76009 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
KRT33AO76009 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
KRT33AO76009 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT33AO76009 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 AL139288.1-201ENST00000623748 933 ntBASIC15.42■□□□□ 0.06
KRT33AO76009 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
KRT33AO76009 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT33AO76009 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 MST1L-201ENST00000442552 2185 ntBASIC15.42■□□□□ 0.06
KRT33AO76009 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
KRT33AO76009 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT33AO76009 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT33AO76009 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT33AO76009 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 AGGF1P2-201ENST00000426656 2106 ntBASIC15.41■□□□□ 0.06
KRT33AO76009 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
KRT33AO76009 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 SPDYE21P-201ENST00000413323 827 ntBASIC15.41■□□□□ 0.06
KRT33AO76009 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT33AO76009 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT33AO76009 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
KRT33AO76009 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 CICP6-201ENST00000457191 2729 ntBASIC15.41■□□□□ 0.06
KRT33AO76009 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT33AO76009 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT33AO76009 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT33AO76009 DOC2GP-204ENST00000639052 2548 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms