Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN3O15551 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN3O15551 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN3O15551 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN3O15551 AC084018.2-201ENST00000613093 2607 ntBASIC18.48■□□□□ 0.55
CLDN3O15551 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CLDN3O15551 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CLDN3O15551 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN3O15551 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN3O15551 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN3O15551 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN3O15551 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN3O15551 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN3O15551 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN3O15551 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN3O15551 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.47■□□□□ 0.55
CLDN3O15551 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN3O15551 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN3O15551 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN3O15551 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN3O15551 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 NKILA-202ENST00000614771 2598 ntBASIC18.46■□□□□ 0.55
CLDN3O15551 AL353732.1-201ENST00000569618 1459 ntBASIC18.46■□□□□ 0.55
CLDN3O15551 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 BX842568.4-201ENST00000421222 227 ntBASIC18.46■□□□□ 0.55
CLDN3O15551 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
CLDN3O15551 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 PDPK2P-202ENST00000562415 1191 ntBASIC18.46■□□□□ 0.55
CLDN3O15551 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CLDN3O15551 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN3O15551 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN3O15551 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN3O15551 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CLDN3O15551 AC011676.5-201ENST00000624864 2660 ntBASIC18.46■□□□□ 0.54
CLDN3O15551 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CLDN3O15551 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN3O15551 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN3O15551 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CLDN3O15551 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN3O15551 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN3O15551 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN3O15551 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN3O15551 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN3O15551 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN3O15551 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN3O15551 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.45■□□□□ 0.54
CLDN3O15551 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms