Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH17O14917 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH17O14917 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH17O14917 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDH17O14917 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 FLJ38576-201ENST00000623820 2459 ntBASIC16.2■□□□□ 0.18
PCDH17O14917 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDH17O14917 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 KRT18P3-201ENST00000451602 1288 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH17O14917 AC040169.1-201ENST00000565382 521 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 AC140113.2-201ENST00000604370 208 ntBASIC16.19■□□□□ 0.18
PCDH17O14917 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
PCDH17O14917 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDH17O14917 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH17O14917 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH17O14917 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH17O14917 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH17O14917 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 AC116353.5-201ENST00000638148 1699 ntBASIC16.18■□□□□ 0.18
PCDH17O14917 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 AC006504.4-201ENST00000592118 1568 ntBASIC16.18■□□□□ 0.18
PCDH17O14917 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDH17O14917 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
PCDH17O14917 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDH17O14917 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDH17O14917 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms