Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.78□□□□□ -0.36
SOCS3O14543 PAWRP1-201ENST00000451083 565 ntBASIC12.78□□□□□ -0.36
SOCS3O14543 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SOCS3O14543 SAPCD2P3-201ENST00000455031 850 ntBASIC12.78□□□□□ -0.36
SOCS3O14543 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.78□□□□□ -0.36
SOCS3O14543 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 AC025062.2-201ENST00000605477 670 ntBASIC12.78□□□□□ -0.36
SOCS3O14543 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.78□□□□□ -0.36
SOCS3O14543 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.78□□□□□ -0.36
SOCS3O14543 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.78□□□□□ -0.36
SOCS3O14543 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SOCS3O14543 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SOCS3O14543 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SOCS3O14543 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.77□□□□□ -0.36
SOCS3O14543 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SOCS3O14543 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.77□□□□□ -0.36
SOCS3O14543 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
SOCS3O14543 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.77□□□□□ -0.36
SOCS3O14543 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SOCS3O14543 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.77□□□□□ -0.37
SOCS3O14543 SCARNA2-201ENST00000458748 420 ntBASIC12.77□□□□□ -0.37
SOCS3O14543 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.77□□□□□ -0.37
SOCS3O14543 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SOCS3O14543 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.77□□□□□ -0.37
SOCS3O14543 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.77□□□□□ -0.37
SOCS3O14543 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.77□□□□□ -0.37
SOCS3O14543 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.77□□□□□ -0.37
SOCS3O14543 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.77□□□□□ -0.37
SOCS3O14543 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.77□□□□□ -0.37
SOCS3O14543 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SOCS3O14543 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SOCS3O14543 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
SOCS3O14543 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 PCDHB19P-201ENST00000570871 2371 ntBASIC12.76□□□□□ -0.37
SOCS3O14543 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.76□□□□□ -0.37
SOCS3O14543 AF238378.1-201ENST00000526806 358 ntBASIC12.76□□□□□ -0.37
SOCS3O14543 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.76□□□□□ -0.37
SOCS3O14543 CLEC4GP1-201ENST00000596555 870 ntBASIC12.76□□□□□ -0.37
SOCS3O14543 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 AC013467.2-201ENST00000605472 835 ntBASIC12.76□□□□□ -0.37
SOCS3O14543 AC012313.10-201ENST00000623509 926 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms