Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CLIC1O00299 PCED1CP-201ENST00000419887 785 ntBASIC15.99■□□□□ 0.15
CLIC1O00299 LINC00982-205ENST00000420957 435 ntBASIC15.99■□□□□ 0.15
CLIC1O00299 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLIC1O00299 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLIC1O00299 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.99■□□□□ 0.15
CLIC1O00299 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.98■□□□□ 0.15
CLIC1O00299 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLIC1O00299 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CLIC1O00299 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 HLA-J-202ENST00000469281 1241 ntBASIC15.98■□□□□ 0.15
CLIC1O00299 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.98■□□□□ 0.15
CLIC1O00299 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 AC006538.1-201ENST00000567905 1585 ntBASIC15.98■□□□□ 0.15
CLIC1O00299 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLIC1O00299 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.98■□□□□ 0.15
CLIC1O00299 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLIC1O00299 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLIC1O00299 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CLIC1O00299 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLIC1O00299 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.97■□□□□ 0.15
CLIC1O00299 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLIC1O00299 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms