Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.33■□□□□ 0.21
AP4B1Q9Y6B7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.33■□□□□ 0.21
AP4B1Q9Y6B7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.33■□□□□ 0.21
AP4B1Q9Y6B7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 TSPY12P-201ENST00000421279 868 ntBASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 DDX43P3-201ENST00000441064 443 ntBASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4B1Q9Y6B7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 AC144831.1-201ENST00000573312 2656 ntBASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP4B1Q9Y6B7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4B1Q9Y6B7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms