Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTDP1Q9Y5B0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 HCG4-201ENST00000418983 998 ntBASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 AL592309.1-201ENST00000443127 649 ntBASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 RARRES2P8-201ENST00000566335 367 ntBASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 AC099522.2-201ENST00000607001 744 ntBASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CTDP1Q9Y5B0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 KRT8P48-201ENST00000515599 1220 ntBASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 LINC00628-201ENST00000628516 1289 ntBASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 AL021920.2-201ENST00000624828 1351 ntBASIC19.52■□□□□ 0.72
CTDP1Q9Y5B0 AL138688.1-201ENST00000624851 1594 ntBASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CTDP1Q9Y5B0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 AL139400.1-201ENST00000366220 510 ntBASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 IGHV3-62-201ENST00000520057 340 ntBASIC19.51■□□□□ 0.71
CTDP1Q9Y5B0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms