Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 HCG4P8-203ENST00000443049 980 ntBASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 BX005266.1-201ENST00000473402 457 ntBASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF11Q9Y3C5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 AC106795.1-205ENST00000512851 1056 ntBASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 MIR3652-201ENST00000579335 131 ntBASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF11Q9Y3C5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF11Q9Y3C5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms