Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 KRT18P48-201ENST00000434763 852 ntBASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RCL1Q9Y2P8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 EGLN1P1-201ENST00000531623 762 ntBASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AL512604.3-201ENST00000569583 964 ntBASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RCL1Q9Y2P8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 LINC02228-204ENST00000642115 2962 ntBASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RCL1Q9Y2P8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms