Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 MCCD1P2-201ENST00000423228 335 ntBASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PRYP5-201ENST00000451909 266 ntBASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 FLJ16779-201ENST00000612722 7638 ntBASIC17.36■□□□□ 0.37
FNDC3AQ9Y2H6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 AC097637.2-201ENST00000624096 1997 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 AC080080.1-201ENST00000625121 2420 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 METTL21AP1-201ENST00000438852 635 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 ALG1L5P-201ENST00000482043 771 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
FNDC3AQ9Y2H6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC3AQ9Y2H6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.34■□□□□ 0.37
FNDC3AQ9Y2H6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC3AQ9Y2H6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms