Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP4E1Q9UPM8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 AC084018.2-201ENST00000613093 2607 ntBASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4E1Q9UPM8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 REXO1L3P-201ENST00000622202 1288 ntBASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 AL391256.1-201ENST00000443260 1855 ntBASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4E1Q9UPM8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AC098831.1-202ENST00000438821 336 ntBASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AC108073.2-201ENST00000464002 357 ntBASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AC093909.1-201ENST00000504731 1122 ntBASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 AC116407.3-201ENST00000623905 1129 ntBASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 LINC00895-201ENST00000629028 1637 ntBASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4E1Q9UPM8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 AL603756.1-201ENST00000606511 2163 ntBASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 AC107918.2-201ENST00000530817 355 ntBASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4E1Q9UPM8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms