Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AL603756.1-201ENST00000606511 2163 ntBASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHA4Q9UN74 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 FLJ38576-201ENST00000623820 2459 ntBASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 HCG4-201ENST00000418983 998 ntBASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 MED15P5-201ENST00000423150 992 ntBASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 AL591424.1-201ENST00000442569 1213 ntBASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 FAM197Y3-203ENST00000618346 717 ntBASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHA4Q9UN74 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 MIR574-201ENST00000385209 96 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 AP000347.1-202ENST00000435868 847 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 KRT18P3-201ENST00000451602 1288 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 AL513480.1-201ENST00000451731 511 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 AC087641.1-201ENST00000557561 1021 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 MIR4515-201ENST00000584082 81 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 CYP2A7P1-201ENST00000595391 815 ntBASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHA4Q9UN74 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 SNX33P1-201ENST00000592116 1762 ntBASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms