Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLCF1Q9UBD9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLCF1Q9UBD9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLCF1Q9UBD9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.04■□□□□ -0
CLCF1Q9UBD9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLCF1Q9UBD9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLCF1Q9UBD9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLCF1Q9UBD9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CLCF1Q9UBD9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AL121761.2-201ENST00000598007 1648 ntBASIC15.03■□□□□ -0
CLCF1Q9UBD9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 PMS2P2-201ENST00000425039 1128 ntBASIC15.03■□□□□ -0
CLCF1Q9UBD9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AC087641.1-201ENST00000557561 1021 ntBASIC15.03■□□□□ -0
CLCF1Q9UBD9 MPDU1-223ENST00000582151 728 ntBASIC15.03■□□□□ -0
CLCF1Q9UBD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AC105339.1-204ENST00000636249 355 ntBASIC15.03■□□□□ -0
CLCF1Q9UBD9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.03■□□□□ -0
CLCF1Q9UBD9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLCF1Q9UBD9 PP12613-201ENST00000424958 2230 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC109635.5-201ENST00000533593 962 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC022145.2-201ENST00000598203 171 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLCF1Q9UBD9 AL009183.1-201ENST00000603760 355 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 AC027612.4-201ENST00000605371 583 ntBASIC15.02■□□□□ -0
CLCF1Q9UBD9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLCF1Q9UBD9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms