Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 AL160237.2-201ENST00000556165 472 ntBASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCM2LQ9NUG4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 LINC01711-201ENST00000598340 967 ntBASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AL391256.1-201ENST00000443260 1855 ntBASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AC097374.2-201ENST00000618617 1306 ntBASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCM2LQ9NUG4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 AL645728.1-201ENST00000366221 2101 ntBASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCM2LQ9NUG4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms