Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC016396.2-201ENST00000562575 1417 ntBASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CDC42SE1Q9NRR8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 TRIM80P-201ENST00000455685 2848 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 FP325330.2-201ENST00000624219 5630 ntBASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC8.59□□□□□ -1.03
CDC42SE1Q9NRR8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms