Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 LINC00895-201ENST00000629028 1637 ntBASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 ALOX12P2-203ENST00000570921 1945 ntBASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TP73-AS1-210ENST00000637775 1455 ntBASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 AL020989.1-201ENST00000422979 469 ntBASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PMPCAP1-201ENST00000508114 1576 ntBASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 AC006538.1-201ENST00000567905 1585 ntBASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE2Q9NRR3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms