Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNMB3Q9NPA1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 PCDHA12-202ENST00000613593 2588 ntBASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNMB3Q9NPA1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 KRT8P39-201ENST00000396270 1433 ntBASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 BX842568.4-201ENST00000421222 227 ntBASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 AC109635.5-201ENST00000533593 962 ntBASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 MTDHP5-201ENST00000598980 586 ntBASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KCNMB3Q9NPA1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNMB3Q9NPA1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms