Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 AC008667.4-201ENST00000607370 168 ntBASIC14.51□□□□□ -0.09
GCM1Q9NP62 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GCM1Q9NP62 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GCM1Q9NP62 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PI4KAP1-204ENST00000612579 1703 ntBASIC14.5□□□□□ -0.09
GCM1Q9NP62 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.5□□□□□ -0.09
GCM1Q9NP62 RPL13AP23-201ENST00000480739 586 ntBASIC14.5□□□□□ -0.09
GCM1Q9NP62 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 RNA5SP415-201ENST00000517246 115 ntBASIC14.5□□□□□ -0.09
GCM1Q9NP62 UNC93B6-202ENST00000528242 690 ntBASIC14.5□□□□□ -0.09
GCM1Q9NP62 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GCM1Q9NP62 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GCM1Q9NP62 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 IGHV3-65-201ENST00000523210 341 ntBASIC14.49□□□□□ -0.09
GCM1Q9NP62 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 TERC-201ENST00000602385 541 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms