Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 AC005412.3-201ENST00000580309 715 ntBASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCSER1Q9C0I3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 AC098831.1-202ENST00000438821 336 ntBASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 AP001005.1-201ENST00000571755 1248 ntBASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 KRT8P39-201ENST00000396270 1433 ntBASIC18.91■□□□□ 0.62
CCSER1Q9C0I3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 PRSS29P-201ENST00000440800 595 ntBASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 AC010654.1-201ENST00000615722 808 ntBASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.9■□□□□ 0.62
CCSER1Q9C0I3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCSER1Q9C0I3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CCSER1Q9C0I3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.89■□□□□ 0.62
CCSER1Q9C0I3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCSER1Q9C0I3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 IGHV3-22-201ENST00000520721 359 ntBASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms