Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF2Q99496 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 BX276092.5-203ENST00000456199 560 ntBASIC13.56□□□□□ -0.24
RNF2Q99496 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.56□□□□□ -0.24
RNF2Q99496 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF2Q99496 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 AC116407.4-201ENST00000623319 1061 ntBASIC13.56□□□□□ -0.24
RNF2Q99496 AC124864.1-201ENST00000623408 392 ntBASIC13.56□□□□□ -0.24
RNF2Q99496 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF2Q99496 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.56□□□□□ -0.24
RNF2Q99496 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 AL365209.1-201ENST00000624418 6473 ntBASIC13.56□□□□□ -0.24
RNF2Q99496 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF2Q99496 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF2Q99496 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF2Q99496 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
RNF2Q99496 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 CYP2T1P-202ENST00000641596 2535 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF2Q99496 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 MIR600HG-201ENST00000449175 5984 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
RNF2Q99496 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF2Q99496 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF2Q99496 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 AP002490.2-201ENST00000524791 560 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 AC090616.6-201ENST00000582640 721 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 AL121672.3-201ENST00000608644 468 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 AL358472.4-201ENST00000633140 710 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF2Q99496 PCDHB17P-201ENST00000539533 2393 ntBASIC13.55□□□□□ -0.24
RNF2Q99496 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF2Q99496 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF2Q99496 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms