Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AL645728.1-201ENST00000366221 2101 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AL391256.1-201ENST00000443260 1855 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AL022342.1-201ENST00000400363 863 ntBASIC14.07□□□□□ -0.16
GAFA1Q96PS6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AC013467.2-201ENST00000605472 835 ntBASIC14.07□□□□□ -0.16
GAFA1Q96PS6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AC010507.1-201ENST00000633895 436 ntBASIC14.07□□□□□ -0.16
GAFA1Q96PS6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 RNF216P1-203ENST00000404404 2427 ntBASIC14.07□□□□□ -0.16
GAFA1Q96PS6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 SLC22A20-204ENST00000530038 1673 ntBASIC14.07□□□□□ -0.16
GAFA1Q96PS6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GAFA1Q96PS6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 AC006277.1-201ENST00000624348 1610 ntBASIC14.06□□□□□ -0.16
GAFA1Q96PS6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.06□□□□□ -0.16
GAFA1Q96PS6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 MIR4492-201ENST00000581627 80 ntBASIC14.06□□□□□ -0.16
GAFA1Q96PS6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 AC131009.4-201ENST00000624048 1740 ntBASIC14.06□□□□□ -0.16
GAFA1Q96PS6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GAFA1Q96PS6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms